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IEICE Trans

Keyword : human genome sequences

A Fast Parallel Algorithm for Indexing Human Genome Sequences
Woong-Kee LOH Kyoung-Soo HAN 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 2014/05/01
Vol. E97-D  No. 5 ; pp. 1345-1348
Type of Manuscript:  LETTER
Category: Data Engineering, Web Information Systems
Keyword: 
human genome sequences, suffix tree, parallel algorithm, suffix array, disk-based index, 
 Summary | Full Text:PDF
A Storage-Efficient Suffix Tree Construction Algorithm for Human Genome Sequences
Woong-Kee LOH Heejune AHN 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 2011/12/01
Vol. E94-D  No. 12 ; pp. 2557-2560
Type of Manuscript:  LETTER
Category: Biological Engineering
Keyword: 
storage-efficient suffix tree, human genome sequences, divide-and-conquer, 
 Summary | Full Text:PDF
A Fast Divide-and-Conquer Algorithm for Indexing Human Genome Sequences
Woong-Kee LOH Yang-Sae MOON Wookey LEE 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 2011/07/01
Vol. E94-D  No. 7 ; pp. 1369-1377
Type of Manuscript:  PAPER
Category: Fundamentals of Information Systems
Keyword: 
human genome sequences, indexing, suffix tree, memory bottleneck problem, divide-and-conquer, parallel processing, 
 Summary | Full Text:PDF