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IEICE Trans

Keyword : Smith-Waterman algorithm

Accelerating Smith-Waterman Algorithm for Biological Database Search on CUDA-Compatible GPUs
Yuma MUNEKAWA Fumihiko INO Kenichi HAGIHARA 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 2010/06/01
Vol. E93-D  No. 6 ; pp. 1479-1488
Type of Manuscript:  Special Section PAPER (Special Section on Info-Plosion)
Category: Parallel and Distributed Architecture
Keyword: 
Smith-Waterman algorithm, sequence alignment, acceleration, GPU, CUDA, 
 Summary | Full Text:PDF