Keyword : bio-informatics


Novel Reconfigurable Hardware Accelerator for Protein Sequence Alignment Using Smith-Waterman Algorithm
Atef IBRAHIM Hamed ELSIMARY Abdullah ALJUMAH 
Publication:   IEICE TRANSACTIONS on Fundamentals of Electronics, Communications and Computer Sciences
Publication Date: 2016/03/01
Vol. E99-A  No. 3 ; pp. 683-690
Type of Manuscript:  PAPER
Category: Digital Signal Processing
Keyword: 
semi-systolic arraysbio-informaticsprotein sequence alignmentSmith-Waterman alignment algorithmbiological computationreconfigurable computing
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What HMMs Can Do
Jeff A. BILMES 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 2006/03/01
Vol. E89-D  No. 3 ; pp. 869-891
Type of Manuscript:  INVITED PAPER (Special Section on Statistical Modeling for Speech Processing)
Category: 
Keyword: 
automatic speech recognitionhidden Markov modelsHMMstime-series processeshand-writing recognitiongraphical modelsdynamic Bayesian networksdynamic graphical modelsstochastic processestime-series densitiesbio-informatics
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Protein Structure Alignment Using Dynamic Programing and Iterative Improvement
Tatsuya AKUTSU 
Publication:   IEICE TRANSACTIONS on Information and Systems
Publication Date: 1996/12/25
Vol. E79-D  No. 12 ; pp. 1629-1636
Type of Manuscript:  PAPER
Category: Algorithm and Computational Complexity
Keyword: 
protein structurealignmentbio-informaticscomputational geometrygeometric pattern matching
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